BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G08SP1|AL427067
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1608 0.0
>3x_Contig1769
Length = 25795
Score = 1608 bits (806), Expect = 0.0
Identities = 846/861 (98%), Gaps = 3/861 (0%)
Strand = Plus / Minus
Query: 1 gatcttgacacggtcatatgaattattgaacaattgaacacgtctgatctggttcaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21454 gatcttgacacggtcatatgaattattgaacaattgaacacgtctgatctggttcaaaat 21395
Query: 61 aggatcattggcatcatccaccatgttgtgagtaacaataggaggtaaagtaccttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21394 aggatcattggcatcatccaccatgttgtgagtaacaataggaggtaaagtaccttctgg 21335
Query: 121 tctacgcaatgcaaatacacgttttttcaatacaactttatcacttggtttgaaaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21334 tctacgcaatgcaaatacacgttttttcaatacaactttatcacttggtttgaaaagttc 21275
Query: 181 gtcaaggctagttggaatttcagttttggtgccattatgaggatatctcatggcgtgttc 240
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 21274 gtcaaggctagttggaatttcagttttggtgccattatgttgatatctcatggcgtgttc 21215
Query: 241 aaagattctcttaccgatcaattgtgtgacatctttcactgagttttccagttgcctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21214 aaagattctcttaccgatcaattgtgtgacatctttcactgagttttccagttgcctgac 21155
Query: 301 cacagcttggccgcgta-ctcatcgactgtgtatgatttattttttgcgggcatgatgat 359
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 21154 cacagcttggccgcgtagctcatcgactgtgtatgatttatnttttgcgggcatgatgat 21095
Query: 360 gaaggcgacaacagtcattttagatccagatgccttcaatctgtggttcaatcttgccaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21094 gaaggcgacaacagtcattttagatccagatgccttcaatctgtggttcaatcttgccaa 21035
Query: 420 tgattcaatgaacatatcagcacccttgttacggtattcataacgacctgcaatgaagaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21034 tgattcaatgaacatatcagcacccttgttacggtattcataacgacctgcaatgaagaa 20975
Query: 480 gtacaaagttttttcaagatcgaaatcgaactgaccatggaaatgacctctgatgaagtc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20974 gtacaaagttttttcaagatcgaaatcgaactgaccatggaaatgacctctgatgaagtc 20915
Query: 540 gttaattttctccytcttcaatgcatgtdaattttggaattcatggacggcttggaattt 599
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 20914 gttaattttctccttcttcaatgcatgtaaattttggaattcatggacggcttggaattt 20855
Query: 600 gatgacatttagcccatttggtaagatcccatcaggtttccgtttcaaaaggtattcact 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20854 gatgacatttagcccatttggtaagatcccatcaggtttccgtttcaaaaggtattcact 20795
Query: 660 ttcgtatgcagtaatctgtg-aamagtaagtgaaaacgtcagcgctatgagctgccgcac 718
|||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 20794 ttcgtatgcagtaatctgtgaaacagt-agtgaaaacgtcagcgctatgagctgccgcac 20736
Query: 719 gttcgatacaataacgatgatagataccacgtttgccagcctctgcmtccmcgtcaaact 778
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 20735 gttcgatacaataacgatgatagataccacgtttgccagcctctgcatccacgtcaaact 20676
Query: 779 tgtcgagattattgtagaratccmcattgccggcacataggtatctacccmacaaagtgg 838
|||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 20675 tgtcgagattattgtagaaatccacattgccggcacataggtatctacccaacaaagtgg 20616
Query: 839 catgagttgtgaaaatggtga 859
||||||| |||||||||||||
Sbjct: 20615 catgagtagtgaaaatggtga 20595
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6016
Number of Sequences: 1807
Number of extensions: 6016
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)